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Biotechnology Information mrna microarray scanning and analysis service
Mrna Microarray Scanning And Analysis Service, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/microarray+mrna+analysis/mrna+microarray+scanning+and+analysis+service/pm35817941-423-5-12
Average 90 stars, based on 1 article reviews
mrna microarray scanning and analysis service - by Bioz Stars, 2026-10
90/100 stars

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Expressing:

Article Title: The heparan sulphate proteoglycan Syndecan-1 (CD138) regulates tumour progression in a 3D model of ductal carcinoma in situ of the breast.
Article Snippet: .. Details on the database are listed in the original publication.24 Briefly, for our analysis, gene chip mRNA expression data extracted from the Gene Expression Omnibus of the National Center for Biotechnology Information (NCBI-GEO) for a sample collective of 242 normal breast tissue samples, 7,569 breast cancer tissues and 3,889 breast cancer metastases were analysed with respect to Sdc-1 expression levels. ..

Gene Expression:

Article Title: The heparan sulphate proteoglycan Syndecan-1 (CD138) regulates tumour progression in a 3D model of ductal carcinoma in situ of the breast.
Article Snippet: .. Details on the database are listed in the original publication.24 Briefly, for our analysis, gene chip mRNA expression data extracted from the Gene Expression Omnibus of the National Center for Biotechnology Information (NCBI-GEO) for a sample collective of 242 normal breast tissue samples, 7,569 breast cancer tissues and 3,889 breast cancer metastases were analysed with respect to Sdc-1 expression levels. ..

Article Title: EPHA3 enhances macrophage autophagy and apoptosis by disrupting the mTOR signaling pathway in mice with endometriosis
Article Snippet: .. Microarray-based gene expression profiling The National Center for Biotechnology Information (NCBI) is a public platform for storing gene expression datasets, original sequences and records. ..

Article Title: Lipid-injured hepatocytes release sOPN to improve macrophage migration via CD44 engagement and pFak-NFκB signaling.
Article Snippet: Background: The key characteristics in the pathogenesis of nonalcoholic steatohepatitis (NASH) are hepatic lipotoxicity, inflammatory cell infiltration (activated macrophages, in part), and varying degrees of fibrosis.. The fatty acid palmitate (PA) can cause hepatocyte cellular dysfunction, but whether and how this process contributes to macrophage-associated inflammation is not well understood.. This study aimed to explore whether lipid-injured hepatocytes result in the secretion of osteopontin (sOPN), and how sOPN induces macrophage migration to steatosis hepatocytes.

Article Title: Integrated bioinformatics and statistical approaches to explore molecular biomarkers for breast cancer diagnosis, prognosis and therapies
Article Snippet: .. We downloaded three microarray gene expression profiling datasets from the National Center of Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database with accession numbers GSE53566 [ ], GSE119552 [ ] and GSE152322 [ ] using the weblink https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE53566 , https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE119552 and https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE152322 , respectively. ..

other:

Article Title: LncRNA XIST modulates 5-hydroxytrytophan-induced visceral hypersensitivity by epigenetic silencing of the SERT gene in mice with diarrhea-predominant IBS.
Article Snippet: Diarrhea-predominant irritable bowel syndrome (IBS-D) is a prevalent gastrointestinal disorder with a high incidence in children.. The role of long non-coding RNAs (lncRNAs) in gastrointestinal diseases has been previously highlighted.. Nevertheless, the underlying regulatory mechanism of lncRNA X inactivate-specific transcript (XIST) in IBS-D requires further studies.

Article Title: <p>Integrated Analysis To Identify Molecular Biomarkers Of High-Grade Serous Ovarian Cancer</p>
Article Snippet: Materials And Methods Gene Expression Profiling Data Gene expression microarray data (GSE14001, GSE18520, GSE26712, GSE27651, GSE40595, and GSE54388) were downloaded from the National Center for Biotechnology Information Gene Expression Omnibus (GEO) database (http://www.ncbi.nlm.nih.gov/geo/).

Microarray:

Article Title: EPHA3 enhances macrophage autophagy and apoptosis by disrupting the mTOR signaling pathway in mice with endometriosis
Article Snippet: .. Microarray-based gene expression profiling The National Center for Biotechnology Information (NCBI) is a public platform for storing gene expression datasets, original sequences and records. ..

Article Title: Lipid-injured hepatocytes release sOPN to improve macrophage migration via CD44 engagement and pFak-NFκB signaling.
Article Snippet: Background: The key characteristics in the pathogenesis of nonalcoholic steatohepatitis (NASH) are hepatic lipotoxicity, inflammatory cell infiltration (activated macrophages, in part), and varying degrees of fibrosis.. The fatty acid palmitate (PA) can cause hepatocyte cellular dysfunction, but whether and how this process contributes to macrophage-associated inflammation is not well understood.. This study aimed to explore whether lipid-injured hepatocytes result in the secretion of osteopontin (sOPN), and how sOPN induces macrophage migration to steatosis hepatocytes.

Article Title: Integrated bioinformatics and statistical approaches to explore molecular biomarkers for breast cancer diagnosis, prognosis and therapies
Article Snippet: .. We downloaded three microarray gene expression profiling datasets from the National Center of Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database with accession numbers GSE53566 [ ], GSE119552 [ ] and GSE152322 [ ] using the weblink https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE53566 , https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE119552 and https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE152322 , respectively. ..

Genome Wide:

Article Title: Lipid-injured hepatocytes release sOPN to improve macrophage migration via CD44 engagement and pFak-NFκB signaling.
Article Snippet: Background: The key characteristics in the pathogenesis of nonalcoholic steatohepatitis (NASH) are hepatic lipotoxicity, inflammatory cell infiltration (activated macrophages, in part), and varying degrees of fibrosis.. The fatty acid palmitate (PA) can cause hepatocyte cellular dysfunction, but whether and how this process contributes to macrophage-associated inflammation is not well understood.. This study aimed to explore whether lipid-injured hepatocytes result in the secretion of osteopontin (sOPN), and how sOPN induces macrophage migration to steatosis hepatocytes.



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(A) Flowchart of candidate miRNA selection. Microarray results were compared between patients with and without subclinical tumors or recurrence under or after adjuvant chemotherapy, and candidate miRNAs were isolated. (B) Volcano plots for candidate miRNAs in patients with recurrence during AC. ( C)(D) GSEA comparing Panc1-GR and Panc1-Pt cells. GSEA-extracted representative gene sets enriched in these cells are shown. ( E) List showing the ranking of candidate miRNAs from the above 5 miRNAs according to the percentage of genes related to the integrin-mediated cell adhesion pathway retrieved by TargetScan.

Journal: PLOS ONE

Article Title: MicroRNA-26a-5p is a reliable biomarker in the adjuvant setting for pancreatic ductal adenocarcinoma

doi: 10.1371/journal.pone.0310328

Figure Lengend Snippet: (A) Flowchart of candidate miRNA selection. Microarray results were compared between patients with and without subclinical tumors or recurrence under or after adjuvant chemotherapy, and candidate miRNAs were isolated. (B) Volcano plots for candidate miRNAs in patients with recurrence during AC. ( C)(D) GSEA comparing Panc1-GR and Panc1-Pt cells. GSEA-extracted representative gene sets enriched in these cells are shown. ( E) List showing the ranking of candidate miRNAs from the above 5 miRNAs according to the percentage of genes related to the integrin-mediated cell adhesion pathway retrieved by TargetScan.

Article Snippet: Messenger RNA (mRNA) microarray analysis was performed by Toray Industries (Tokyo, Japan) using the TORAY 3D‐Gene ® platform.

Techniques: Selection, Microarray, Adjuvant, Isolation

Transcriptomic analysis of the TMJ synovium samples from normal and CFA-injected rats. (a) Schematic diagram of the experimental design and procedure for sample preparation for mRNA microarray. (b) Volcano plots of differentially expressed genes (DEGs). (c) Clustered heat map of all targets. (d) Heat map of the inflammation-related genes (fold change ≥ 2.0 and P < 0.05). (e) KEGG pathway enrichment analysis on differentially expressed genes between the control and CFA-injected groups.

Journal: Oxidative Medicine and Cellular Longevity

Article Title: GLX351322, a Novel NADPH Oxidase 4 Inhibitor, Attenuates TMJ Osteoarthritis by Inhibiting the ROS/MAPK/NF- κ B Signaling Pathways

doi: 10.1155/2023/1952348

Figure Lengend Snippet: Transcriptomic analysis of the TMJ synovium samples from normal and CFA-injected rats. (a) Schematic diagram of the experimental design and procedure for sample preparation for mRNA microarray. (b) Volcano plots of differentially expressed genes (DEGs). (c) Clustered heat map of all targets. (d) Heat map of the inflammation-related genes (fold change ≥ 2.0 and P < 0.05). (e) KEGG pathway enrichment analysis on differentially expressed genes between the control and CFA-injected groups.

Article Snippet: Total RNA was extracted by using a TRIzol reagent, and gene expression was examined by mRNA microarray analysis (KangChen Bio-tech, Shanghai, China).

Techniques: Injection, Sample Prep, Microarray